Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AC080125.1-201ENST00000414888 684 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 RPL7P10-201ENST00000417407 739 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AL592437.1-201ENST00000443781 492 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AL590399.6-201ENST00000446396 307 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 RPL23AP15-201ENST00000450202 459 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 RNU7-170P-201ENST00000459303 61 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 FAM172BP-201ENST00000487497 1089 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 RPS29P21-201ENST00000496272 170 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AL133271.1-201ENST00000538229 291 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AC008126.1-201ENST00000549019 480 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 OR2B8P-201ENST00000432841 938 ntBASIC3.32□□□□□ -1.88
SCN11AQ9UI33 RPL23AP74-201ENST00000437246 471 ntBASIC3.32□□□□□ -1.88
SCN11AQ9UI33 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 AP003102.1-201ENST00000525638 661 ntBASIC3.32□□□□□ -1.88
SCN11AQ9UI33 AL392112.1-201ENST00000605115 829 ntBASIC3.32□□□□□ -1.88
SCN11AQ9UI33 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 AC067852.7-201ENST00000623270 535 ntBASIC3.32□□□□□ -1.88
SCN11AQ9UI33 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCN11AQ9UI33 AC087565.3-202ENST00000642085 1603 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 AL359511.1-201ENST00000402970 211 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 RPS4XP7-201ENST00000406274 780 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 MIR1289-2-201ENST00000408360 111 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 SMC4P1-201ENST00000414479 527 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 AL662791.1-201ENST00000441992 928 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 OR6K1P-201ENST00000456766 971 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 AC006445.2-201ENST00000510061 472 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 AC055876.1-202ENST00000567053 138 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 DEFB122-202ENST00000569013 197 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 HSPA8P4-201ENST00000511877 1920 ntBASIC3.31□□□□□ -1.88
SCN11AQ9UI33 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCN11AQ9UI33 MIR27B-201ENST00000385129 97 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 MIR137-201ENST00000385223 102 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 ATF1P1-201ENST00000406040 927 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 RPS20P5-201ENST00000434808 360 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AC021205.1-201ENST00000468797 348 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AP001646.1-201ENST00000527936 915 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 NPM1P35-201ENST00000533043 868 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AL389895.1-201ENST00000554127 252 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AC025034.2-201ENST00000623264 286 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 NANOGP5-201ENST00000424456 877 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 UBE2D3P1-201ENST00000436669 444 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AC008280.2-201ENST00000455473 307 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 RN7SL297P-201ENST00000483161 293 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AC011037.1-201ENST00000483964 558 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 GTF2H2B-203ENST00000508065 1432 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AC019227.1-201ENST00000526902 510 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 CRYM-AS1-204ENST00000637983 556 ntBASIC3.3□□□□□ -1.88
SCN11AQ9UI33 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SCN11AQ9UI33 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AL049610.1-201ENST00000423374 372 ntBASIC3.29□□□□□ -1.88
SCN11AQ9UI33 HMGN2P3-201ENST00000433603 273 ntBASIC3.29□□□□□ -1.88
SCN11AQ9UI33 HMGN2P5-201ENST00000436882 273 ntBASIC3.29□□□□□ -1.88
SCN11AQ9UI33 EIF2S2P4-201ENST00000461070 984 ntBASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AC090819.1-201ENST00000523800 1111 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms