Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RPL23AP57-201ENST00000332361 466 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 SNORA57.1-201ENST00000391227 145 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 ARL2BPP3-201ENST00000421226 480 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 MTND4LP14-201ENST00000429447 288 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC005189.1-201ENST00000431286 310 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC091390.1-201ENST00000433904 331 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RPS26P56-201ENST00000444468 240 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RPL23AP23-201ENST00000452590 471 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 NPM1P13-201ENST00000452663 865 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RPS15AP1-201ENST00000457423 391 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 snoU13.24-201ENST00000458998 104 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC015724.1-201ENST00000478577 156 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RN7SL283P-201ENST00000489055 303 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 RNF138P1-201ENST00000502765 546 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC118282.1-201ENST00000506408 765 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC119751.1-201ENST00000513357 765 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 PAICSP4-201ENST00000517543 1253 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC026403.1-201ENST00000518938 295 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC016911.1-201ENST00000613297 452 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC039056.2-201ENST00000622261 511 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 MIR6810-201ENST00000622701 70 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 AC020923.1-201ENST00000624021 917 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
VAPAQ9P0L0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.96□□□□□ -1.93
VAPAQ9P0L0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.96□□□□□ -1.93
VAPAQ9P0L0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 RNA5SP479-201ENST00000364858 117 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 SNORD51.1-201ENST00000365405 77 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 MIR490-201ENST00000384865 128 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 RAB28P1-201ENST00000411517 641 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 HMGB3P31-201ENST00000413333 595 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 SDCBPP3-201ENST00000419629 891 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AL133547.1-201ENST00000448546 220 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 ELOCP23-201ENST00000452014 332 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 RPS24P6-201ENST00000452670 400 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 DNAJC19P8-201ENST00000452887 259 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 snoU13.3-201ENST00000459441 104 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 RN7SKP43-201ENST00000516173 320 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 SNORA31.20-201ENST00000517111 133 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AP000619.3-201ENST00000535634 1127 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC093014.1-201ENST00000548926 724 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC034268.2-201ENST00000571784 482 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 CCDC58P3-201ENST00000590792 430 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AL109653.1-201ENST00000603091 248 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 BX322635.1-201ENST00000605804 496 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC006963.1-201ENST00000624003 1052 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC092608.3-201ENST00000625017 386 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC012442.3-202ENST00000636742 206 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 AC008264.2-201ENST00000610193 3731 ntBASIC2.96□□□□□ -1.94
VAPAQ9P0L0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAPAQ9P0L0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 RNU6-1339P-201ENST00000363574 91 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 RNU6-837P-201ENST00000391056 108 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC110754.1-201ENST00000399740 601 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 SSXP10-201ENST00000402595 565 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 SFR1P1-201ENST00000403720 688 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms