Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 Z99127.2-201ENST00000441426 334 ntBASIC2.53□□□□□ -2
CHD8Q9HCK8 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.53□□□□□ -2
CHD8Q9HCK8 AC004696.1-201ENST00000614345 607 ntBASIC2.53□□□□□ -2
CHD8Q9HCK8 AC233309.1-201ENST00000619522 751 ntBASIC2.53□□□□□ -2
CHD8Q9HCK8 AC016542.2-201ENST00000624201 619 ntBASIC2.53□□□□□ -2
CHD8Q9HCK8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CHD8Q9HCK8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.53□□□□□ -2
CHD8Q9HCK8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CHD8Q9HCK8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
CHD8Q9HCK8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 RNA5SP322-201ENST00000363617 119 ntBASIC2.53□□□□□ -2.01
CHD8Q9HCK8 Y_RNA.251-201ENST00000364551 99 ntBASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AC069218.2-201ENST00000411665 344 ntBASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AL136981.2-201ENST00000617319 734 ntBASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.53□□□□□ -2.01
CHD8Q9HCK8 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AL356057.3-201ENST00000402607 340 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 NANOGP6-201ENST00000429190 847 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 HIGD1AP2-201ENST00000446367 280 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 HMGN1P5-201ENST00000448591 263 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC093663.2-201ENST00000484625 313 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC007390.2-201ENST00000606229 3803 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AL669942.2-201ENST00000620352 697 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC092593.1-201ENST00000515413 1815 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 Y_RNA.68-201ENST00000362881 102 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 RNA5SP146-201ENST00000410743 123 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC008716.1-201ENST00000511084 513 ntBASIC2.52□□□□□ -2.01
CHD8Q9HCK8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.52□□□□□ -2.01
CHD8Q9HCK8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 CR381670.1-201ENST00000624291 1693 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 YWHAEP5-201ENST00000431545 765 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 AC080013.2-201ENST00000460866 323 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 AC092991.1-201ENST00000477176 376 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 AC090525.1-201ENST00000479116 478 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 AC234781.5-201ENST00000508429 271 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 BTG4P1-201ENST00000510421 183 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 TRMT112P2-201ENST00000512910 132 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 MIR6504-201ENST00000613520 61 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 MIR3199-2-201ENST00000636243 86 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 RBBP8P1-201ENST00000449447 1844 ntBASIC2.51□□□□□ -2.01
CHD8Q9HCK8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD8Q9HCK8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 NPM1P49-201ENST00000448027 714 ntBASIC2.5□□□□□ -2.01
CHD8Q9HCK8 SEPT14P1-201ENST00000458703 648 ntBASIC2.5□□□□□ -2.01
CHD8Q9HCK8 HSPE1P18-201ENST00000517602 280 ntBASIC2.5□□□□□ -2.01
CHD8Q9HCK8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 AC012020.1-201ENST00000624541 1728 ntBASIC2.5□□□□□ -2.01
CHD8Q9HCK8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 AC243972.3-201ENST00000539655 198 ntBASIC2.5□□□□□ -2.01
CHD8Q9HCK8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 AC011494.1-201ENST00000596454 237 ntBASIC2.5□□□□□ -2.01
CHD8Q9HCK8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.5□□□□□ -2.01
CHD8Q9HCK8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHD8Q9HCK8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHD8Q9HCK8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHD8Q9HCK8 MTND5P24-201ENST00000438892 1767 ntBASIC2.49□□□□□ -2.01
CHD8Q9HCK8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.49□□□□□ -2.01
CHD8Q9HCK8 AC010733.2-201ENST00000589496 5702 ntBASIC2.49□□□□□ -2.01
CHD8Q9HCK8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CHD8Q9HCK8 SNORD62.1-201ENST00000362541 86 ntBASIC2.49□□□□□ -2.01
CHD8Q9HCK8 RPL21P109-201ENST00000422213 475 ntBASIC2.49□□□□□ -2.01
CHD8Q9HCK8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms