Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC114546.3-201ENST00000623582 1734 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC105074.1-201ENST00000623380 3095 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-254P-201ENST00000363377 107 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RNY1P12-201ENST00000364251 105 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RNY4P16-201ENST00000364768 94 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-510P-201ENST00000391239 108 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 MIR1286-201ENST00000408112 78 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RPL26P29-201ENST00000415623 438 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RPS7P15-201ENST00000415804 584 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 UQCRBP1-201ENST00000421129 336 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC006548.1-201ENST00000427470 102 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RBMY2QP-201ENST00000429799 1147 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RPL34P6-201ENST00000432390 345 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AL161722.2-201ENST00000434731 981 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC236972.2-201ENST00000434979 310 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 GAPDHP58-201ENST00000438477 1006 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AL513533.1-201ENST00000453728 415 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC005229.2-201ENST00000456995 399 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RNU7-63P-201ENST00000459054 62 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 MRPS17P3-201ENST00000465453 385 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 OR2AO1P-201ENST00000476497 403 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 NPM1P41-201ENST00000512920 831 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RNU4-49P-201ENST00000516080 140 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 SNORD60.2-201ENST00000516883 86 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RNA5SP373-201ENST00000517271 95 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 SUB1P1-201ENST00000524415 382 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 OR4R1P-201ENST00000529879 463 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AL390726.5-202ENST00000564800 256 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 HMGB1P6-201ENST00000569046 646 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 MIR4742-201ENST00000581069 85 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 KC877982.1-201ENST00000602313 470 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC087763.1-201ENST00000603391 286 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 SUMO2P15-201ENST00000604285 278 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC011626.1-201ENST00000604710 562 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC113139.1-201ENST00000605049 239 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 BX323046.1-201ENST00000610145 535 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC105429.2-201ENST00000610567 517 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC104237.2-201ENST00000612456 443 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC008121.3-201ENST00000618726 433 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 MIR6837-201ENST00000620884 64 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC090971.5-201ENST00000621102 293 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AL356585.4-201ENST00000623078 1229 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 CR381572.1-201ENST00000625098 102 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AL118496.1-201ENST00000440201 1812 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 AC063976.2-201ENST00000425667 3556 ntBASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A2Q9H9S3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 AL731532.2-201ENST00000623542 1953 ntBASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 OR55B1P-203ENST00000641518 2602 ntBASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 AC011493.1-201ENST00000596753 1632 ntBASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 OR4G1P-203ENST00000641984 1631 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms