Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL606517.1-201ENST00000446914 387 ntBASIC4□□□□□ -1.77
LIMK1P53667 AL034418.1-201ENST00000448675 860 ntBASIC4□□□□□ -1.77
LIMK1P53667 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 PNPLA4P1-201ENST00000458328 305 ntBASIC4□□□□□ -1.77
LIMK1P53667 AC005410.1-202ENST00000460347 485 ntBASIC4□□□□□ -1.77
LIMK1P53667 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 RPL7P22-201ENST00000466005 733 ntBASIC4□□□□□ -1.77
LIMK1P53667 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 RPS29P19-201ENST00000479709 171 ntBASIC4□□□□□ -1.77
LIMK1P53667 AC108734.3-201ENST00000481241 1165 ntBASIC4□□□□□ -1.77
LIMK1P53667 RPL23AP44-201ENST00000482216 473 ntBASIC4□□□□□ -1.77
LIMK1P53667 RPS4XP15-201ENST00000489210 795 ntBASIC4□□□□□ -1.77
LIMK1P53667 RN7SL323P-201ENST00000494712 295 ntBASIC4□□□□□ -1.77
LIMK1P53667 AC025554.1-201ENST00000505641 188 ntBASIC4□□□□□ -1.77
LIMK1P53667 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4□□□□□ -1.77
LIMK1P53667 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4□□□□□ -1.77
LIMK1P53667 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4□□□□□ -1.77
LIMK1P53667 PHBP17-201ENST00000528576 541 ntBASIC4□□□□□ -1.77
LIMK1P53667 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 AC244505.7-201ENST00000599675 272 ntBASIC4□□□□□ -1.77
LIMK1P53667 ELOCP35-201ENST00000604289 336 ntBASIC4□□□□□ -1.77
LIMK1P53667 AC012603.1-201ENST00000606424 528 ntBASIC4□□□□□ -1.77
LIMK1P53667 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4□□□□□ -1.77
LIMK1P53667 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 FP236240.3-201ENST00000623061 327 ntBASIC4□□□□□ -1.77
LIMK1P53667 AC007546.2-201ENST00000623996 360 ntBASIC4□□□□□ -1.77
LIMK1P53667 AC092184.1-201ENST00000625042 715 ntBASIC4□□□□□ -1.77
LIMK1P53667 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4□□□□□ -1.77
LIMK1P53667 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 MTCO1P12-201ENST00000414273 1543 ntBASIC4□□□□□ -1.77
LIMK1P53667 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 AL049781.1-201ENST00000623195 3585 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.99□□□□□ -1.77
LIMK1P53667 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIMK1P53667 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LIMK1P53667 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.99□□□□□ -1.77
LIMK1P53667 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.99□□□□□ -1.77
LIMK1P53667 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
LIMK1P53667 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIMK1P53667 NACA3P-201ENST00000359690 648 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 RNA5SP295-201ENST00000362655 121 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 RNVU1-3-201ENST00000364313 161 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIMK1P53667 RNU6-1181P-201ENST00000384191 106 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AP000567.1-201ENST00000406413 156 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 RPL23AP47-201ENST00000408017 460 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 MIR1179-201ENST00000408703 91 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 RPS29P4-201ENST00000414733 161 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC007390.1-201ENST00000415722 356 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.99□□□□□ -1.77
LIMK1P53667 MRPS36P1-201ENST00000421291 307 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.99□□□□□ -1.77
LIMK1P53667 GTF2IP7-202ENST00000436677 309 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 RPL23AP89-201ENST00000439324 255 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.99□□□□□ -1.77
LIMK1P53667 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LIMK1P53667 ZNF886P-201ENST00000450781 723 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.99□□□□□ -1.77
LIMK1P53667 RN7SL293P-201ENST00000481765 281 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC013828.1-201ENST00000481845 158 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.99□□□□□ -1.77
LIMK1P53667 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.99□□□□□ -1.77
LIMK1P53667 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.99□□□□□ -1.77
LIMK1P53667 AC005798.1-201ENST00000513715 387 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 RN7SKP244-201ENST00000516513 307 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 SNORA48.10-201ENST00000516965 160 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.99□□□□□ -1.77
LIMK1P53667 AC092470.1-201ENST00000546187 132 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC012182.1-201ENST00000570133 895 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.99□□□□□ -1.77
LIMK1P53667 AL031985.2-201ENST00000600955 480 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AL390838.2-201ENST00000602394 274 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC005344.1-201ENST00000613391 459 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.99□□□□□ -1.77
LIMK1P53667 AL359715.5-201ENST00000623431 443 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 SCARNA15.3-201ENST00000626315 122 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 SCARNA4.1-201ENST00000628597 123 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.99□□□□□ -1.77
LIMK1P53667 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIMK1P53667 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LIMK1P53667 AP001350.1-201ENST00000601906 1524 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 AC117529.2-201ENST00000512159 2068 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LIMK1P53667 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.99□□□□□ -1.77
LIMK1P53667 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
LIMK1P53667 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIMK1P53667 AL355578.1-201ENST00000607405 1328 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC099786.3-201ENST00000565735 1410 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LIMK1P53667 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIMK1P53667 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIMK1P53667 RNU6-413P-201ENST00000384115 107 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 SNORA40.2-201ENST00000390847 128 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 RNU6-837P-201ENST00000391056 108 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 RNU2-42P-201ENST00000410697 113 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 RNU4-22P-201ENST00000411058 166 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 JKAMPP1-201ENST00000413804 919 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms