Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.77
CLCNKAP51800 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCNKAP51800 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCNKAP51800 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCNKAP51800 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCNKAP51800 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 RNU6-921P-201ENST00000384361 107 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 RPL23AP29-201ENST00000397284 453 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 MIR1193-201ENST00000408109 78 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 MIR1284-201ENST00000408337 120 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 TIMM9P2-201ENST00000419324 266 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 AL391219.1-201ENST00000422570 483 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 USP9YP7-201ENST00000436723 430 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.02□□□□□ -1.77
CLCNKAP51800 RPL21P89-201ENST00000444021 467 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 MTND2P4-201ENST00000445034 1004 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 USP9YP32-201ENST00000452432 430 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC087385.1-201ENST00000475062 312 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC006499.6-201ENST00000511169 607 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC090502.2-201ENST00000549267 280 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCNKAP51800 RPL23AP87-202ENST00000573039 466 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 MIR432-201ENST00000606207 94 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 OR2AS2P-201ENST00000606902 342 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 AP001521.1-201ENST00000609150 300 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC091931.1-201ENST00000623488 728 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCNKAP51800 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCNKAP51800 MTND4P34-201ENST00000572715 1371 ntBASIC4.02□□□□□ -1.77
CLCNKAP51800 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CLCNKAP51800 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLCNKAP51800 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCNKAP51800 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CLCNKAP51800 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCNKAP51800 RLIMP1-201ENST00000339626 1680 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CLCNKAP51800 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCNKAP51800 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CLCNKAP51800 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLCNKAP51800 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLCNKAP51800 RNA5SP479-201ENST00000364858 117 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 RNU6-253P-201ENST00000384730 105 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCNKAP51800 RPL21P65-201ENST00000406094 466 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 RNU2-28P-201ENST00000410457 189 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 PIGPP2-201ENST00000411569 458 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 HSPE1P12-201ENST00000412576 301 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCNKAP51800 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 ELOCP8-201ENST00000439309 332 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 ELOCP15-201ENST00000442090 332 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 AC118469.1-201ENST00000442943 488 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 RPS4XP4-201ENST00000443195 763 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 SLC31A1P1-201ENST00000451221 567 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 HMGN3P1-201ENST00000453847 193 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCNKAP51800 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLCNKAP51800 RN7SL271P-201ENST00000487601 295 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 RPL29P14-201ENST00000495837 428 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 AC104685.1-201ENST00000502445 371 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CLCNKAP51800 MTCYBP17-201ENST00000503579 789 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 AC090071.1-201ENST00000507713 644 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 OR5BM1P-201ENST00000512021 366 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CLCNKAP51800 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCNKAP51800 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.01□□□□□ -1.77
CLCNKAP51800 IGHV3-32-201ENST00000519182 355 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 IFITM8P-201ENST00000522529 394 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 ARL2BPP5-201ENST00000523141 481 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCNKAP51800 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.01□□□□□ -1.77
CLCNKAP51800 AC084824.1-201ENST00000550917 1005 ntBASIC4.01□□□□□ -1.77
CLCNKAP51800 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms