Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.297-201ENST00000364950 91 ntBASIC6.25□□□□□ -1.41
VARSP26640 RNA5SP85-201ENST00000365378 119 ntBASIC6.25□□□□□ -1.41
VARSP26640 Y_RNA.399-201ENST00000383955 105 ntBASIC6.25□□□□□ -1.41
VARSP26640 Y_RNA.518-201ENST00000384552 113 ntBASIC6.25□□□□□ -1.41
VARSP26640 RNU2-14P-201ENST00000411053 191 ntBASIC6.25□□□□□ -1.41
VARSP26640 RNU6-293P-201ENST00000411259 106 ntBASIC6.25□□□□□ -1.41
VARSP26640 RNU2-71P-201ENST00000411395 189 ntBASIC6.25□□□□□ -1.41
VARSP26640 AL389925.1-201ENST00000432257 728 ntBASIC6.25□□□□□ -1.41
VARSP26640 RPL21P112-201ENST00000434403 463 ntBASIC6.25□□□□□ -1.41
VARSP26640 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.25□□□□□ -1.41
VARSP26640 RHOT1P3-201ENST00000436571 331 ntBASIC6.25□□□□□ -1.41
VARSP26640 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.25□□□□□ -1.41
VARSP26640 COL11A2P1-205ENST00000441798 676 ntBASIC6.25□□□□□ -1.41
VARSP26640 AC097359.1-201ENST00000447946 463 ntBASIC6.25□□□□□ -1.41
VARSP26640 AL139109.1-201ENST00000455491 297 ntBASIC6.25□□□□□ -1.41
VARSP26640 Z83838.1-202ENST00000456225 839 ntBASIC6.25□□□□□ -1.41
VARSP26640 AC093852.1-201ENST00000503587 266 ntBASIC6.25□□□□□ -1.41
VARSP26640 Y_RNA.703-201ENST00000516846 111 ntBASIC6.25□□□□□ -1.41
VARSP26640 RNU6-1092P-201ENST00000516955 87 ntBASIC6.25□□□□□ -1.41
VARSP26640 AL133271.1-201ENST00000538229 291 ntBASIC6.25□□□□□ -1.41
VARSP26640 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.25□□□□□ -1.41
VARSP26640 AC002310.3-201ENST00000569728 723 ntBASIC6.25□□□□□ -1.41
VARSP26640 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.25□□□□□ -1.41
VARSP26640 AC008162.1-201ENST00000604718 254 ntBASIC6.25□□□□□ -1.41
VARSP26640 AL670379.4-201ENST00000605279 254 ntBASIC6.25□□□□□ -1.41
VARSP26640 HMGN2P28-201ENST00000606102 262 ntBASIC6.25□□□□□ -1.41
VARSP26640 AC022400.9-201ENST00000623633 273 ntBASIC6.25□□□□□ -1.41
VARSP26640 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.25□□□□□ -1.41
VARSP26640 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VARSP26640 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARSP26640 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARSP26640 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VARSP26640 AC008669.1-201ENST00000565823 2178 ntBASIC6.25□□□□□ -1.41
VARSP26640 LINC01613-201ENST00000561476 2780 ntBASIC6.25□□□□□ -1.41
VARSP26640 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
VARSP26640 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VARSP26640 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.25□□□□□ -1.41
VARSP26640 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARSP26640 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VARSP26640 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARSP26640 SAGE3P-201ENST00000619800 1635 ntBASIC6.25□□□□□ -1.41
VARSP26640 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.24□□□□□ -1.41
VARSP26640 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 AL121886.1-201ENST00000358609 435 ntBASIC6.24□□□□□ -1.41
VARSP26640 Y_RNA.274-201ENST00000364714 101 ntBASIC6.24□□□□□ -1.41
VARSP26640 RNA5SP485-201ENST00000365053 119 ntBASIC6.24□□□□□ -1.41
VARSP26640 RNA5SP240-201ENST00000365355 128 ntBASIC6.24□□□□□ -1.41
VARSP26640 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
VARSP26640 RNU6-393P-201ENST00000384475 107 ntBASIC6.24□□□□□ -1.41
VARSP26640 Y_RNA.539-201ENST00000384635 107 ntBASIC6.24□□□□□ -1.41
VARSP26640 AC004386.1-201ENST00000393214 761 ntBASIC6.24□□□□□ -1.41
VARSP26640 MIR548H3-201ENST00000408771 118 ntBASIC6.24□□□□□ -1.41
VARSP26640 RNA5SP107-201ENST00000411358 122 ntBASIC6.24□□□□□ -1.41
VARSP26640 AC108032.1-201ENST00000416706 207 ntBASIC6.24□□□□□ -1.41
VARSP26640 AC099782.1-201ENST00000425889 474 ntBASIC6.24□□□□□ -1.41
VARSP26640 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.24□□□□□ -1.41
VARSP26640 AP000936.3-201ENST00000438127 255 ntBASIC6.24□□□□□ -1.41
VARSP26640 RPS26P56-201ENST00000444468 240 ntBASIC6.24□□□□□ -1.41
VARSP26640 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.24□□□□□ -1.41
VARSP26640 SETP20-201ENST00000457046 852 ntBASIC6.24□□□□□ -1.41
VARSP26640 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.24□□□□□ -1.41
VARSP26640 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.24□□□□□ -1.41
VARSP26640 RNU6-685P-201ENST00000517088 95 ntBASIC6.24□□□□□ -1.41
VARSP26640 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.24□□□□□ -1.41
VARSP26640 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.24□□□□□ -1.41
VARSP26640 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.24□□□□□ -1.41
VARSP26640 AC090517.1-201ENST00000569307 266 ntBASIC6.24□□□□□ -1.41
VARSP26640 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.24□□□□□ -1.41
VARSP26640 AL590099.1-201ENST00000615276 138 ntBASIC6.24□□□□□ -1.41
VARSP26640 MIR6071-201ENST00000616741 78 ntBASIC6.24□□□□□ -1.41
VARSP26640 AC127459.3-201ENST00000624328 466 ntBASIC6.24□□□□□ -1.41
VARSP26640 AL049555.1-201ENST00000562834 1933 ntBASIC6.24□□□□□ -1.41
VARSP26640 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.24□□□□□ -1.41
VARSP26640 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
VARSP26640 SAMMSON-213ENST00000641336 1521 ntBASIC6.24□□□□□ -1.41
VARSP26640 AL592148.3-201ENST00000608771 2646 ntBASIC6.24□□□□□ -1.41
VARSP26640 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.24□□□□□ -1.41
VARSP26640 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARSP26640 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 AL359854.1-201ENST00000614203 1594 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC011369.2-201ENST00000624423 1567 ntBASIC6.23□□□□□ -1.41
VARSP26640 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms