Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.9□□□□□ -1.79
ERCC2P18074 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.9□□□□□ -1.79
ERCC2P18074 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.9□□□□□ -1.79
ERCC2P18074 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ERCC2P18074 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ERCC2P18074 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ERCC2P18074 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC2P18074 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC2P18074 RNA5SP258-201ENST00000362750 119 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 RNU6-560P-201ENST00000364007 108 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 SNORD116.1-201ENST00000365628 92 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ERCC2P18074 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ERCC2P18074 RNU6-821P-201ENST00000390995 107 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 U3.29-201ENST00000391296 212 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 RPL31P1-201ENST00000398116 372 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.89□□□□□ -1.79
ERCC2P18074 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 HSFY1P1-201ENST00000423928 1178 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC2P18074 USP9YP31-201ENST00000431405 881 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 MTCYBP11-201ENST00000447254 1109 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC2P18074 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC2P18074 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 AC023141.12-201ENST00000512399 199 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 RNU6-415P-201ENST00000516252 97 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 AP004371.1-201ENST00000525240 214 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AP001636.2-201ENST00000525517 696 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 AP004242.1-201ENST00000533701 349 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC2P18074 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 HIGD1AP17-201ENST00000554576 276 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AL133457.1-201ENST00000564251 987 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AL360157.1-201ENST00000565962 87 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC2P18074 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.89□□□□□ -1.79
ERCC2P18074 AP001269.3-201ENST00000588718 329 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 BNIP3P26-201ENST00000600827 554 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.89□□□□□ -1.79
ERCC2P18074 AC027449.1-201ENST00000608890 407 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 MIR486-1-201ENST00000612171 68 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 AC024941.1-201ENST00000612250 334 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC2P18074 U6.101-201ENST00000637707 76 ntBASIC3.89□□□□□ -1.79
ERCC2P18074 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC2P18074 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC2P18074 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC2P18074 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC2P18074 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC2P18074 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ERCC2P18074 RN7SKP280-201ENST00000364196 304 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 RNA5SP189-201ENST00000364920 115 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC2P18074 RNU6-906P-201ENST00000384700 70 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ERCC2P18074 RNU6-1242P-201ENST00000391052 103 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 SOD2P1-201ENST00000396543 562 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 MIR1193-201ENST00000408109 78 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 AC068533.2-201ENST00000411872 306 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.88□□□□□ -1.79
ERCC2P18074 MTND2P9-201ENST00000422293 931 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 RPL7P2-201ENST00000427639 268 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.88□□□□□ -1.79
ERCC2P18074 AC092427.1-201ENST00000439177 601 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 RPL39P6-201ENST00000448289 150 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 SLC31A1P1-201ENST00000451221 567 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 UBDP1-202ENST00000457888 382 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 RN7SL132P-201ENST00000478131 296 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 HMGB1P28-201ENST00000507778 552 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 AC108043.1-201ENST00000512696 574 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.88□□□□□ -1.79
ERCC2P18074 RNU2-58P-201ENST00000516403 183 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
ERCC2P18074 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.88□□□□□ -1.79
ERCC2P18074 AP000619.3-201ENST00000535634 1127 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.88□□□□□ -1.79
ERCC2P18074 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.88□□□□□ -1.79
ERCC2P18074 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.88□□□□□ -1.79
ERCC2P18074 HSPE1P5-201ENST00000561489 272 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.88□□□□□ -1.79
ERCC2P18074 AC087499.8-201ENST00000578406 226 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.88□□□□□ -1.79
ERCC2P18074 MIR5685-201ENST00000579080 79 ntBASIC3.88□□□□□ -1.79
ERCC2P18074 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.88□□□□□ -1.79
ERCC2P18074 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC2P18074 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms