Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AP002963.1-201ENST00000530590 184 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AP000873.5-201ENST00000533906 236 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 TVP23BP1-201ENST00000557500 617 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC113194.1-201ENST00000606037 500 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AP005264.7-201ENST00000625003 745 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC092104.1-201ENST00000497346 1441 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 Z82217.1-201ENST00000625157 8149 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC018555.1-201ENST00000567548 1980 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 ASNSP1-201ENST00000518311 1939 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 MIR192-201ENST00000384915 110 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 RN7SKP142-201ENST00000411236 328 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC092647.1-201ENST00000420654 287 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 BRWD1P3-201ENST00000428816 390 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC011276.1-201ENST00000469688 323 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 RN7SL481P-201ENST00000477764 299 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC068587.4-201ENST00000533893 186 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC141257.3-201ENST00000572906 215 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 MIR5186-201ENST00000577504 120 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AP000403.1-201ENST00000603349 851 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC112187.2-201ENST00000604345 283 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC128687.1-201ENST00000605304 619 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC087752.4-201ENST00000605911 462 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC010857.1-201ENST00000606398 594 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC009509.4-201ENST00000619202 509 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 GDI2P1-201ENST00000429312 1336 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 AC116667.1-201ENST00000604855 2072 ntBASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TCRBV7S3A2A0A539 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 MTND4P4-201ENST00000439033 1366 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 RPL23AP57-201ENST00000332361 466 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 RNA5SP513-201ENST00000364648 118 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 ENSAP1-201ENST00000392855 326 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 DHFRP6-201ENST00000401776 268 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 HMGB1P11-201ENST00000413899 637 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 RPS15AP40-201ENST00000419621 391 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 DLGAP5P1-201ENST00000430307 464 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 ATP5C1P1-201ENST00000441945 895 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 COX6CP12-201ENST00000446748 202 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AL592447.1-201ENST00000447592 540 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 ST13P20-201ENST00000447996 1065 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 SNRPGP9-201ENST00000456025 225 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 RPL36AP13-201ENST00000457490 317 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms