Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 Z98044.1-201ENST00000632503 1764 ntBASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 AC133041.1-202ENST00000642053 222 ntBASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA3Q9Y5H8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 AC069152.1-201ENST00000438030 544 ntBASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PCDHA3Q9Y5H8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA3Q9Y5H8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 AL109923.1-201ENST00000618799 583 ntBASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA3Q9Y5H8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 UNC93B4-201ENST00000505679 747 ntBASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 AC009113.1-201ENST00000570267 2443 ntBASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 AL512353.2-201ENST00000448759 1962 ntBASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA3Q9Y5H8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms