Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 AC005521.1-201ENST00000393351 872 ntBASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 AL590326.2-201ENST00000625139 305 ntBASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 AC007952.6-201ENST00000573168 2673 ntBASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 AC003957.1-201ENST00000625108 2673 ntBASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB1Q9Y5F3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 NUDT16P1-203ENST00000513809 620 ntBASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 REXO1L10P-201ENST00000615707 1290 ntBASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB1Q9Y5F3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 MIR1238-201ENST00000408483 83 ntBASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 KRT18P57-201ENST00000443599 1254 ntBASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 AL032819.2-201ENST00000624543 2162 ntBASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB1Q9Y5F3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms