Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 RPPH1-201ENST00000516869 333 ntBASIC20.28■□□□□ 0.84
GDF3Q9NR23 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 AC120498.9-201ENST00000339021 3867 ntBASIC20.28■□□□□ 0.84
GDF3Q9NR23 PHGDH-210ENST00000641115 1638 ntBASIC20.27■□□□□ 0.84
GDF3Q9NR23 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDF3Q9NR23 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDF3Q9NR23 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDF3Q9NR23 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDF3Q9NR23 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDF3Q9NR23 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF3Q9NR23 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GDF3Q9NR23 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GDF3Q9NR23 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GDF3Q9NR23 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.27■□□□□ 0.83
GDF3Q9NR23 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GDF3Q9NR23 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
GDF3Q9NR23 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.27■□□□□ 0.83
GDF3Q9NR23 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 AL031598.1-201ENST00000561511 1773 ntBASIC20.26■□□□□ 0.83
GDF3Q9NR23 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 TEX21P-204ENST00000641479 1693 ntBASIC20.26■□□□□ 0.83
GDF3Q9NR23 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.26■□□□□ 0.83
GDF3Q9NR23 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDF3Q9NR23 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.25■□□□□ 0.83
GDF3Q9NR23 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GDF3Q9NR23 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.25■□□□□ 0.83
GDF3Q9NR23 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
GDF3Q9NR23 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.25■□□□□ 0.83
GDF3Q9NR23 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.25■□□□□ 0.83
GDF3Q9NR23 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.25■□□□□ 0.83
GDF3Q9NR23 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 RN7SL471P-201ENST00000580476 299 ntBASIC20.25■□□□□ 0.83
GDF3Q9NR23 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 AC090164.3-201ENST00000610780 2143 ntBASIC20.25■□□□□ 0.83
GDF3Q9NR23 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF3Q9NR23 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.25■□□□□ 0.83
GDF3Q9NR23 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms