Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 TMEM179-206ENST00000616017 1645 ntBASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN3Q9NQS3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AC008550.1-201ENST00000511500 884 ntBASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AP006294.2-201ENST00000641667 209 ntBASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN3Q9NQS3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NECTIN3Q9NQS3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.39■□□□□ 0.54
NECTIN3Q9NQS3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.39■□□□□ 0.54
NECTIN3Q9NQS3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
NECTIN3Q9NQS3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 KRT18P16-201ENST00000510337 1294 ntBASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 AC093827.2-201ENST00000512654 315 ntBASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 Z99916.2-201ENST00000604037 246 ntBASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 AC093503.3-201ENST00000624917 2352 ntBASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NECTIN3Q9NQS3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms