Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 AC006333.2-201ENST00000607957 2099 ntBASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4BQ9NPR2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 KRT18P16-201ENST00000510337 1294 ntBASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 CROCCP3-202ENST00000420820 1947 ntBASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4BQ9NPR2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4BQ9NPR2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEMA4BQ9NPR2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.77■□□□□ 0.59
SEMA4BQ9NPR2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SEMA4BQ9NPR2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEMA4BQ9NPR2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms