Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 AL020996.1-203ENST00000536896 2307 ntBASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEUROD4Q9HD90 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 AP003097.1-201ENST00000530657 1135 ntBASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEUROD4Q9HD90 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEUROD4Q9HD90 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 AC004408.2-201ENST00000623613 2777 ntBASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 AC004264.1-201ENST00000608354 794 ntBASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.11■□□□□ 0.49
NEUROD4Q9HD90 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms