Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 FAM207BP-201ENST00000447172 505 ntBASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 SLC25A1P4-201ENST00000567977 778 ntBASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 AP000692.2-201ENST00000608391 879 ntBASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.26■□□□□ 0.51
ZNF304Q9HCX3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 CRYGFP-201ENST00000418459 633 ntBASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 AC091390.4-202ENST00000476426 537 ntBASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 NAPSB-206ENST00000562112 1266 ntBASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF304Q9HCX3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 KRT8P9-201ENST00000558927 1449 ntBASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 AC008040.2-201ENST00000461049 708 ntBASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 AP005242.2-201ENST00000580065 1175 ntBASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 AC097493.4-201ENST00000641197 219 ntBASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF304Q9HCX3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 HCG11-201ENST00000411553 5696 ntBASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF304Q9HCX3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms