Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 PLK5-205ENST00000642079 1969 ntBASIC20.16■□□□□ 0.82
CD248Q9HCU0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 MIR1224-201ENST00000408193 85 ntBASIC20.16■□□□□ 0.82
CD248Q9HCU0 AL353807.1-201ENST00000427475 662 ntBASIC20.16■□□□□ 0.82
CD248Q9HCU0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CD248Q9HCU0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD248Q9HCU0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.15■□□□□ 0.82
CD248Q9HCU0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD248Q9HCU0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CD248Q9HCU0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.14■□□□□ 0.82
CD248Q9HCU0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CD248Q9HCU0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
CD248Q9HCU0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.14■□□□□ 0.82
CD248Q9HCU0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 RCN1P1-201ENST00000400413 996 ntBASIC20.14■□□□□ 0.81
CD248Q9HCU0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 FAM197Y1-201ENST00000421178 764 ntBASIC20.14■□□□□ 0.81
CD248Q9HCU0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 KRT18P21-201ENST00000515767 1272 ntBASIC20.14■□□□□ 0.81
CD248Q9HCU0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 AC073195.1-201ENST00000607241 877 ntBASIC20.14■□□□□ 0.81
CD248Q9HCU0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CD248Q9HCU0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD248Q9HCU0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 AC010331.1-201ENST00000611423 582 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms