Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHMP4BQ9H444 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CHMP4BQ9H444 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC24.25■■□□□ 1.47
CHMP4BQ9H444 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC24.25■■□□□ 1.47
CHMP4BQ9H444 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.25■■□□□ 1.47
CHMP4BQ9H444 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHMP4BQ9H444 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC24.25■■□□□ 1.47
CHMP4BQ9H444 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 AP000974.1-201ENST00000623909 2387 ntBASIC24.24■■□□□ 1.47
CHMP4BQ9H444 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 AL353807.1-201ENST00000427475 662 ntBASIC24.24■■□□□ 1.47
CHMP4BQ9H444 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 FAM201B-201ENST00000458407 597 ntBASIC24.24■■□□□ 1.47
CHMP4BQ9H444 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 AL353708.3-201ENST00000610272 989 ntBASIC24.24■■□□□ 1.47
CHMP4BQ9H444 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHMP4BQ9H444 AL161938.1-201ENST00000569833 2180 ntBASIC24.23■■□□□ 1.47
CHMP4BQ9H444 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 AL445675.2-201ENST00000620291 557 ntBASIC24.23■■□□□ 1.47
CHMP4BQ9H444 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 FEM1AP3-201ENST00000403722 1741 ntBASIC24.23■■□□□ 1.47
CHMP4BQ9H444 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHMP4BQ9H444 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHMP4BQ9H444 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 C1QBPP2-201ENST00000528754 825 ntBASIC24.21■■□□□ 1.47
CHMP4BQ9H444 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 MIR4651-201ENST00000582622 73 ntBASIC24.21■■□□□ 1.47
CHMP4BQ9H444 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 AC131212.4-201ENST00000623606 975 ntBASIC24.21■■□□□ 1.47
CHMP4BQ9H444 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHMP4BQ9H444 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CHMP4BQ9H444 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHMP4BQ9H444 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CHMP4BQ9H444 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.2■■□□□ 1.46
CHMP4BQ9H444 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms