Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VPS16Q9H269 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS16Q9H269 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS16Q9H269 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.12■□□□□ 0.97
VPS16Q9H269 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS16Q9H269 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.12■□□□□ 0.97
VPS16Q9H269 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
VPS16Q9H269 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS16Q9H269 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS16Q9H269 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS16Q9H269 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS16Q9H269 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VPS16Q9H269 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS16Q9H269 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.11■□□□□ 0.97
VPS16Q9H269 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.11■□□□□ 0.97
VPS16Q9H269 AC060766.5-201ENST00000590539 871 ntBASIC21.11■□□□□ 0.97
VPS16Q9H269 AC120498.8-201ENST00000614275 531 ntBASIC21.11■□□□□ 0.97
VPS16Q9H269 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.11■□□□□ 0.97
VPS16Q9H269 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS16Q9H269 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.1■□□□□ 0.97
VPS16Q9H269 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS16Q9H269 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
VPS16Q9H269 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.1■□□□□ 0.97
VPS16Q9H269 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS16Q9H269 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS16Q9H269 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.1■□□□□ 0.97
VPS16Q9H269 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.1■□□□□ 0.97
VPS16Q9H269 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.1■□□□□ 0.97
VPS16Q9H269 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.1■□□□□ 0.97
VPS16Q9H269 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 AL138781.1-201ENST00000566567 1274 ntBASIC21.1■□□□□ 0.97
VPS16Q9H269 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
VPS16Q9H269 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 IRX1P1-201ENST00000438849 1838 ntBASIC21.1■□□□□ 0.97
VPS16Q9H269 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.1■□□□□ 0.97
VPS16Q9H269 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS16Q9H269 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.09■□□□□ 0.97
VPS16Q9H269 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS16Q9H269 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.09■□□□□ 0.97
VPS16Q9H269 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.09■□□□□ 0.97
VPS16Q9H269 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS16Q9H269 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 AC083880.1-201ENST00000608266 535 ntBASIC21.09■□□□□ 0.97
VPS16Q9H269 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.09■□□□□ 0.97
VPS16Q9H269 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
VPS16Q9H269 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 AC007613.1-201ENST00000572811 2597 ntBASIC21.09■□□□□ 0.97
VPS16Q9H269 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
VPS16Q9H269 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS16Q9H269 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VPS16Q9H269 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.08■□□□□ 0.97
VPS16Q9H269 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
VPS16Q9H269 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS16Q9H269 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS16Q9H269 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS16Q9H269 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
VPS16Q9H269 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS16Q9H269 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
VPS16Q9H269 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms