Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN3Q9BTN0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRFN3Q9BTN0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.22■□□□□ 0.67
LRFN3Q9BTN0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN3Q9BTN0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN3Q9BTN0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AC242852.2-201ENST00000615738 1807 ntBASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 AL157888.1-201ENST00000631930 593 ntBASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LRFN3Q9BTN0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 LINC01465-201ENST00000408887 1940 ntBASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 AC040169.1-201ENST00000565382 521 ntBASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 AC011467.4-201ENST00000594891 528 ntBASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN3Q9BTN0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 KRT18P3-201ENST00000451602 1288 ntBASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.19■□□□□ 0.66
LRFN3Q9BTN0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 KRT8P11-201ENST00000409686 1436 ntBASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms