Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 CDCA4P2-201ENST00000441182 718 ntBASIC11.44□□□□□ -0.58
LIMD2Q9BT23 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 IKBKGP1-201ENST00000612193 1073 ntBASIC11.44□□□□□ -0.58
LIMD2Q9BT23 PFKL-212ENST00000628044 129 ntTSL 3 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 STK25-204ENST00000405585 1643 ntTSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 PTBP1P-201ENST00000554374 1601 ntBASIC11.44□□□□□ -0.58
LIMD2Q9BT23 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 AC009237.14-201ENST00000609975 1594 ntBASIC11.44□□□□□ -0.58
LIMD2Q9BT23 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 RER1-204ENST00000378518 522 ntTSL 3 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CALM3-202ENST00000391918 702 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 GGT1-206ENST00000404223 952 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 MAX-217ENST00000557277 728 ntTSL 3 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 AC092118.2-201ENST00000613495 667 ntBASIC11.43□□□□□ -0.58
LIMD2Q9BT23 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 AC092437.1-201ENST00000624794 1048 ntBASIC11.43□□□□□ -0.58
LIMD2Q9BT23 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC11.43□□□□□ -0.58
LIMD2Q9BT23 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 GPX1P1-201ENST00000388829 606 ntBASIC11.42□□□□□ -0.58
LIMD2Q9BT23 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms