Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 FAM197Y1-201ENST00000421178 764 ntBASIC17.13■□□□□ 0.33
USB1Q9BQ65 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 SMG8-203ENST00000578922 2178 ntBASIC17.13■□□□□ 0.33
USB1Q9BQ65 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USB1Q9BQ65 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.13■□□□□ 0.33
USB1Q9BQ65 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 AC131212.4-201ENST00000623606 975 ntBASIC17.12■□□□□ 0.33
USB1Q9BQ65 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
USB1Q9BQ65 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
USB1Q9BQ65 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.11■□□□□ 0.33
USB1Q9BQ65 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 NOC2LP1-202ENST00000452600 2235 ntBASIC17.11■□□□□ 0.33
USB1Q9BQ65 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.11■□□□□ 0.33
USB1Q9BQ65 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 AC116562.2-201ENST00000507042 360 ntBASIC17.11■□□□□ 0.33
USB1Q9BQ65 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.11■□□□□ 0.33
USB1Q9BQ65 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.11■□□□□ 0.33
USB1Q9BQ65 CR392000.1-201ENST00000624770 1228 ntBASIC17.11■□□□□ 0.33
USB1Q9BQ65 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
USB1Q9BQ65 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 FSCN1P1-201ENST00000568912 1481 ntBASIC17.11■□□□□ 0.33
USB1Q9BQ65 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
USB1Q9BQ65 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USB1Q9BQ65 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
USB1Q9BQ65 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 UNC93B2-201ENST00000285383 730 ntBASIC17.1■□□□□ 0.33
USB1Q9BQ65 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USB1Q9BQ65 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.1■□□□□ 0.33
USB1Q9BQ65 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.1■□□□□ 0.33
USB1Q9BQ65 LINC01023-201ENST00000606054 436 ntBASIC17.1■□□□□ 0.33
USB1Q9BQ65 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms