Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC034232.1-201ENST00000506026 1064 ntBASIC16.19■□□□□ 0.18
FOXC2Q99958 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXC2Q99958 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FOXC2Q99958 LINC01711-201ENST00000598340 967 ntBASIC16.19■□□□□ 0.18
FOXC2Q99958 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FOXC2Q99958 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXC2Q99958 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXC2Q99958 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXC2Q99958 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXC2Q99958 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXC2Q99958 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FOXC2Q99958 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXC2Q99958 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXC2Q99958 BX119927.1-201ENST00000636596 1552 ntBASIC16.18■□□□□ 0.18
FOXC2Q99958 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXC2Q99958 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 AL031008.1-201ENST00000619963 541 ntBASIC16.18■□□□□ 0.18
FOXC2Q99958 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
FOXC2Q99958 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXC2Q99958 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXC2Q99958 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXC2Q99958 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 AC005229.4-201ENST00000610085 2198 ntBASIC16.17■□□□□ 0.18
FOXC2Q99958 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXC2Q99958 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXC2Q99958 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXC2Q99958 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 EMBP1-201ENST00000458200 901 ntBASIC16.17■□□□□ 0.18
FOXC2Q99958 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXC2Q99958 AC104692.2-201ENST00000603054 253 ntBASIC16.17■□□□□ 0.18
FOXC2Q99958 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXC2Q99958 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXC2Q99958 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
FOXC2Q99958 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXC2Q99958 AL121603.2-201ENST00000557373 2117 ntBASIC16.16■□□□□ 0.18
FOXC2Q99958 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
FOXC2Q99958 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXC2Q99958 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXC2Q99958 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXC2Q99958 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXC2Q99958 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXC2Q99958 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXC2Q99958 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
FOXC2Q99958 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXC2Q99958 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXC2Q99958 TSPY19P-201ENST00000418461 509 ntBASIC16.16■□□□□ 0.18
FOXC2Q99958 TSPY18P-201ENST00000441642 509 ntBASIC16.16■□□□□ 0.18
FOXC2Q99958 RASA4DP-201ENST00000460726 1199 ntBASIC16.16■□□□□ 0.18
FOXC2Q99958 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
FOXC2Q99958 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
FOXC2Q99958 AL121772.3-201ENST00000610840 674 ntBASIC16.16■□□□□ 0.18
FOXC2Q99958 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXC2Q99958 AC117500.6-201ENST00000624871 588 ntBASIC16.16■□□□□ 0.18
FOXC2Q99958 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXC2Q99958 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXC2Q99958 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FOXC2Q99958 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXC2Q99958 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXC2Q99958 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXC2Q99958 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXC2Q99958 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXC2Q99958 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXC2Q99958 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXC2Q99958 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXC2Q99958 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.15■□□□□ 0.18
FOXC2Q99958 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXC2Q99958 AP002383.4-201ENST00000442518 975 ntBASIC16.15■□□□□ 0.18
FOXC2Q99958 AC106795.1-205ENST00000512851 1056 ntBASIC16.15■□□□□ 0.18
FOXC2Q99958 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXC2Q99958 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms