Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL19Q99731 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.24■□□□□ 0.19
CCL19Q99731 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL19Q99731 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.24■□□□□ 0.19
CCL19Q99731 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL19Q99731 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL19Q99731 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL19Q99731 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.24■□□□□ 0.19
CCL19Q99731 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL19Q99731 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL19Q99731 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.24■□□□□ 0.19
CCL19Q99731 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL19Q99731 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL19Q99731 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL19Q99731 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL19Q99731 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.23■□□□□ 0.19
CCL19Q99731 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.23■□□□□ 0.19
CCL19Q99731 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CCL19Q99731 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.23■□□□□ 0.19
CCL19Q99731 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.23■□□□□ 0.19
CCL19Q99731 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCL19Q99731 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL19Q99731 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CCL19Q99731 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 AC009237.14-201ENST00000609975 1594 ntBASIC16.22■□□□□ 0.19
CCL19Q99731 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCL19Q99731 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL19Q99731 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CCL19Q99731 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 SPDYE15P-201ENST00000424157 909 ntBASIC16.22■□□□□ 0.19
CCL19Q99731 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL19Q99731 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL19Q99731 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL19Q99731 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL19Q99731 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL19Q99731 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL19Q99731 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL19Q99731 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 AC034232.1-201ENST00000506026 1064 ntBASIC16.21■□□□□ 0.19
CCL19Q99731 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL19Q99731 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CCL19Q99731 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCL19Q99731 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL19Q99731 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL19Q99731 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL19Q99731 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CCL19Q99731 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL19Q99731 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL19Q99731 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL19Q99731 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCL19Q99731 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL19Q99731 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL19Q99731 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCL19Q99731 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL19Q99731 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL19Q99731 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL19Q99731 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL19Q99731 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms