Protein–RNA interactions for Protein: Q96T51

RUFY1, RUN and FYVE domain-containing protein 1, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1Q96T51 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.24■□□□□ 0.83
RUFY1Q96T51 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RUFY1Q96T51 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.24■□□□□ 0.83
RUFY1Q96T51 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.24■□□□□ 0.83
RUFY1Q96T51 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.24■□□□□ 0.83
RUFY1Q96T51 UBE2DNL-204ENST00000602536 740 ntBASIC20.24■□□□□ 0.83
RUFY1Q96T51 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUFY1Q96T51 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.24■□□□□ 0.83
RUFY1Q96T51 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 AL355802.2-201ENST00000402069 882 ntBASIC20.23■□□□□ 0.83
RUFY1Q96T51 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 KRT18P11-201ENST00000435214 1283 ntBASIC20.23■□□□□ 0.83
RUFY1Q96T51 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RUFY1Q96T51 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY1Q96T51 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 AC090164.3-201ENST00000610780 2143 ntBASIC20.22■□□□□ 0.83
RUFY1Q96T51 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 AL109923.1-201ENST00000618799 583 ntBASIC20.22■□□□□ 0.83
RUFY1Q96T51 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY1Q96T51 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RUFY1Q96T51 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 AL133373.2-201ENST00000623187 2828 ntBASIC20.21■□□□□ 0.83
RUFY1Q96T51 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 AL050303.2-201ENST00000619798 666 ntBASIC20.21■□□□□ 0.83
RUFY1Q96T51 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY1Q96T51 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.21■□□□□ 0.83
RUFY1Q96T51 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
RUFY1Q96T51 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY1Q96T51 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY1Q96T51 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY1Q96T51 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RUFY1Q96T51 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RUFY1Q96T51 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RUFY1Q96T51 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY1Q96T51 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY1Q96T51 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.2■□□□□ 0.82
RUFY1Q96T51 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms