Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 MIR6786-201ENST00000616843 113 ntBASIC16.01■□□□□ 0.15
GAFA1Q96PS6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 AC141586.3-201ENST00000562166 1838 ntBASIC16.01■□□□□ 0.15
GAFA1Q96PS6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
GAFA1Q96PS6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16■□□□□ 0.15
GAFA1Q96PS6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
GAFA1Q96PS6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16■□□□□ 0.15
GAFA1Q96PS6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
GAFA1Q96PS6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16■□□□□ 0.15
GAFA1Q96PS6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 TSPY7P-201ENST00000431358 1114 ntBASIC16■□□□□ 0.15
GAFA1Q96PS6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16■□□□□ 0.15
GAFA1Q96PS6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 SNORA78-201ENST00000459373 127 ntBASIC16■□□□□ 0.15
GAFA1Q96PS6 B3GAT3P1-201ENST00000471720 806 ntBASIC16■□□□□ 0.15
GAFA1Q96PS6 AC011506.1-201ENST00000474329 610 ntBASIC16■□□□□ 0.15
GAFA1Q96PS6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16■□□□□ 0.15
GAFA1Q96PS6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16■□□□□ 0.15
GAFA1Q96PS6 AC026471.5-201ENST00000615068 467 ntBASIC16■□□□□ 0.15
GAFA1Q96PS6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
GAFA1Q96PS6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16■□□□□ 0.15
GAFA1Q96PS6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16■□□□□ 0.15
GAFA1Q96PS6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16■□□□□ 0.15
GAFA1Q96PS6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
GAFA1Q96PS6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 MESTP1-201ENST00000404287 994 ntBASIC15.99■□□□□ 0.15
GAFA1Q96PS6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 AL355355.2-201ENST00000442321 338 ntBASIC15.99■□□□□ 0.15
GAFA1Q96PS6 AC091390.4-202ENST00000476426 537 ntBASIC15.99■□□□□ 0.15
GAFA1Q96PS6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 AC011298.2-201ENST00000617989 482 ntBASIC15.99■□□□□ 0.15
GAFA1Q96PS6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
GAFA1Q96PS6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 FSCN1P1-201ENST00000568912 1481 ntBASIC15.98■□□□□ 0.15
GAFA1Q96PS6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 TSPY21P-201ENST00000433481 731 ntBASIC15.98■□□□□ 0.15
GAFA1Q96PS6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms