Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.83■□□□□ 0.76
RPRD1AQ96P16 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.83■□□□□ 0.76
RPRD1AQ96P16 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RPRD1AQ96P16 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.83■□□□□ 0.76
RPRD1AQ96P16 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RPRD1AQ96P16 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RPRD1AQ96P16 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPRD1AQ96P16 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 MIR1238-201ENST00000408483 83 ntBASIC19.82■□□□□ 0.76
RPRD1AQ96P16 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.82■□□□□ 0.76
RPRD1AQ96P16 AP000692.2-201ENST00000608391 879 ntBASIC19.82■□□□□ 0.76
RPRD1AQ96P16 AC073912.3-201ENST00000624414 853 ntBASIC19.82■□□□□ 0.76
RPRD1AQ96P16 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
RPRD1AQ96P16 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 AC097488.1-201ENST00000507834 756 ntBASIC19.81■□□□□ 0.76
RPRD1AQ96P16 SLC25A1P4-201ENST00000567977 778 ntBASIC19.81■□□□□ 0.76
RPRD1AQ96P16 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPRD1AQ96P16 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 Z82202.1-201ENST00000623446 1880 ntBASIC19.8■□□□□ 0.76
RPRD1AQ96P16 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 AL390955.1-201ENST00000428694 934 ntBASIC19.8■□□□□ 0.76
RPRD1AQ96P16 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPRD1AQ96P16 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 MMP23A-201ENST00000234610 1017 ntBASIC19.79■□□□□ 0.76
RPRD1AQ96P16 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms