Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 LINC00265-3P-201ENST00000447588 903 ntBASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 AP006587.1-201ENST00000534129 1502 ntBASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3BQ96NU0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 CHCHD2P8-201ENST00000429873 447 ntBASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 AC092597.1-201ENST00000487352 616 ntBASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNTNAP3BQ96NU0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 KRT8P26-201ENST00000534154 1276 ntBASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 SART3-203ENST00000546611 1184 ntBASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 NEK4P2-201ENST00000580004 1012 ntBASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP3BQ96NU0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 FBXW4P1-201ENST00000426721 2239 ntBASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 AL035633.1-201ENST00000406139 838 ntBASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms