Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPGRIP1Q96KN7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 DPP3P2-201ENST00000416030 1696 ntBASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 AL353807.1-201ENST00000427475 662 ntBASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 RBM17P1-201ENST00000453646 1190 ntBASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 KRT16P5-201ENST00000455284 522 ntBASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 AP000525.1-201ENST00000608286 694 ntBASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RPGRIP1Q96KN7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPGRIP1Q96KN7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RPGRIP1Q96KN7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RPGRIP1Q96KN7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.14■□□□□ 0.98
RPGRIP1Q96KN7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPGRIP1Q96KN7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.14■□□□□ 0.98
RPGRIP1Q96KN7 LINC01568-207ENST00000641790 1380 ntBASIC21.14■□□□□ 0.98
RPGRIP1Q96KN7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 AC113347.1-201ENST00000413321 391 ntBASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRIP1Q96KN7 AC079598.2-202ENST00000546624 1451 ntBASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms