Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRNP40Q96DI7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRNP40Q96DI7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRNP40Q96DI7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SNRNP40Q96DI7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRNP40Q96DI7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRNP40Q96DI7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 TSPY21P-201ENST00000433481 731 ntBASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 TSPY23P-201ENST00000440136 739 ntBASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 SPDYE13P-201ENST00000445314 798 ntBASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 AC092119.3-201ENST00000612618 583 ntBASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 NPAP1P7-201ENST00000613027 823 ntBASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRNP40Q96DI7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNRNP40Q96DI7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.27■□□□□ 0.35
SNRNP40Q96DI7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNRNP40Q96DI7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.27■□□□□ 0.35
SNRNP40Q96DI7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNRNP40Q96DI7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.27■□□□□ 0.35
SNRNP40Q96DI7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNRNP40Q96DI7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRNP40Q96DI7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms