Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 AC008040.2-201ENST00000461049 708 ntBASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 FSCN1P1-201ENST00000568912 1481 ntBASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 MIR6786-201ENST00000616843 113 ntBASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 FP475955.4-201ENST00000623131 1990 ntBASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 BX323043.1-201ENST00000641006 1765 ntBASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTHRC1Q96CG8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 KRT8P11-201ENST00000409686 1436 ntBASIC17.83■□□□□ 0.45
CTHRC1Q96CG8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 AC011298.2-201ENST00000617989 482 ntBASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTHRC1Q96CG8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 PRSS44-201ENST00000515154 1146 ntBASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.82■□□□□ 0.44
CTHRC1Q96CG8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms