Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 TMEM179-206ENST00000616017 1645 ntBASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VTI1AQ96AJ9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 PCED1CP-201ENST00000419887 785 ntBASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 AL512604.3-201ENST00000569583 964 ntBASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 AC093458.2-201ENST00000623150 629 ntBASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 AL031432.5-201ENST00000641059 760 ntBASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VTI1AQ96AJ9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 AC092338.2-201ENST00000568827 1415 ntBASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VTI1AQ96AJ9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 BX119927.1-201ENST00000636596 1552 ntBASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 KRT126P-201ENST00000549467 1181 ntBASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 AL121894.2-201ENST00000602977 491 ntBASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
VTI1AQ96AJ9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms