Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AC093520.2-201ENST00000561830 333 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AL033527.4-201ENST00000641026 673 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AL157888.1-201ENST00000631930 593 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AL390955.2-201ENST00000603032 514 ntBASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 MIR1909-201ENST00000411312 80 ntBASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC004812.2-201ENST00000611079 2094 ntBASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 LINC01465-201ENST00000408887 1940 ntBASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC096582.2-201ENST00000510860 516 ntBASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 RN7SL190P-201ENST00000582519 257 ntBASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 AC008608.2-201ENST00000606089 416 ntBASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE2Q8WXH0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC009947.1-201ENST00000444350 727 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AP005018.1-201ENST00000525475 301 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 MIR6787-201ENST00000616675 61 ntBASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE2Q8WXH0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms