Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CHMP7Q8WUX9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP7Q8WUX9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC31.27■■■□□ 2.6
CHMP7Q8WUX9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP7Q8WUX9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP7Q8WUX9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
CHMP7Q8WUX9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CHMP7Q8WUX9 GPAT2P1-201ENST00000444924 1672 ntBASIC31.26■■■□□ 2.6
CHMP7Q8WUX9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC31.26■■■□□ 2.6
CHMP7Q8WUX9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP7Q8WUX9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP7Q8WUX9 SLC25A1P1-201ENST00000528351 927 ntBASIC31.26■■■□□ 2.59
CHMP7Q8WUX9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP7Q8WUX9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP7Q8WUX9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP7Q8WUX9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP7Q8WUX9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 MIR1233-2-201ENST00000408138 82 ntBASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 MIR1233-1-201ENST00000408722 82 ntBASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 AC074051.2-201ENST00000565115 352 ntBASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP7Q8WUX9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 AC092865.5-201ENST00000545435 363 ntBASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 AC036111.1-201ENST00000533973 1582 ntBASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP7Q8WUX9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 TK1-205ENST00000590862 642 ntTSL 3 BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP7Q8WUX9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC31.22■■■□□ 2.59
CHMP7Q8WUX9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 FAM220CP-201ENST00000395253 831 ntBASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 AP001005.1-201ENST00000571755 1248 ntBASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP7Q8WUX9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC31.2■■■□□ 2.59
CHMP7Q8WUX9 AC099336.1-202ENST00000602961 463 ntBASIC31.2■■■□□ 2.59
CHMP7Q8WUX9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CHMP7Q8WUX9 LINC00167-201ENST00000530583 1419 ntBASIC31.2■■■□□ 2.59
CHMP7Q8WUX9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CHMP7Q8WUX9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CHMP7Q8WUX9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC31.2■■■□□ 2.58
CHMP7Q8WUX9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CHMP7Q8WUX9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CHMP7Q8WUX9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CHMP7Q8WUX9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms