Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 MESTP1-201ENST00000404287 994 ntBASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 AC011506.1-201ENST00000474329 610 ntBASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 RCC2P6-201ENST00000526625 1557 ntBASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 AC087499.1-201ENST00000418141 1075 ntBASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
FNDC9Q8TBE3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 MMP23A-201ENST00000234610 1017 ntBASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 MIR1238-201ENST00000408483 83 ntBASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 AC211429.1-201ENST00000415277 523 ntBASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 AL160286.2-201ENST00000567150 934 ntBASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNDC9Q8TBE3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms