Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 CCDC92B-201ENST00000575506 885 ntBASIC14.38□□□□□ -0.11
NUP35Q8NFH5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP35Q8NFH5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 AC106820.2-201ENST00000563775 3264 ntBASIC14.37□□□□□ -0.11
NUP35Q8NFH5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 UNC93B3-201ENST00000308076 687 ntBASIC14.37□□□□□ -0.11
NUP35Q8NFH5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP35Q8NFH5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 AC024257.2-201ENST00000549699 147 ntBASIC14.36□□□□□ -0.11
NUP35Q8NFH5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 AC008764.6-201ENST00000595909 2069 ntBASIC14.36□□□□□ -0.11
NUP35Q8NFH5 OR6D1P-202ENST00000641007 5290 ntBASIC14.36□□□□□ -0.11
NUP35Q8NFH5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP35Q8NFH5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 ANO7L1-203ENST00000602586 1720 ntBASIC14.35□□□□□ -0.11
NUP35Q8NFH5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms