Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 MIR4651-201ENST00000582622 73 ntBASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 AC124016.1-201ENST00000609552 612 ntBASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC9CQ8N5M4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 AC141586.3-201ENST00000562166 1838 ntBASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC9CQ8N5M4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 AIRN-201ENST00000601203 4374 ntBASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 AC018445.3-201ENST00000624177 1945 ntBASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 SDHAP1-207ENST00000440850 2000 ntBASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 FAM201B-201ENST00000458407 597 ntBASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC9CQ8N5M4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 TEX21P-204ENST00000641479 1693 ntBASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms