Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 RASA4DP-201ENST00000460726 1199 ntBASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 CR769767.2-201ENST00000622735 460 ntBASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.69■□□□□ 0.74
SLC44A3Q8N4M1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 TSSC2-201ENST00000450217 709 ntBASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 AC011498.5-201ENST00000592027 486 ntBASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A3Q8N4M1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 AC004870.1-201ENST00000315132 882 ntBASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 AC016734.2-201ENST00000624325 1377 ntBASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SLC44A3Q8N4M1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 AC026310.3-201ENST00000625186 2373 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 BX276092.5-203ENST00000456199 560 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 AC034232.1-201ENST00000506026 1064 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 UNC93B7-201ENST00000509439 705 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 AC111152.3-201ENST00000569699 673 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 MIR3180-1-201ENST00000580374 94 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 MIR3180-3-201ENST00000584616 94 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A3Q8N4M1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC44A3Q8N4M1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC44A3Q8N4M1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A3Q8N4M1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms