Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 AC005332.8-201ENST00000622750 2735 ntBASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 CYP21A1P-202ENST00000354927 1481 ntBASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.85■□□□□ 0.45
DEPDC4Q8N2C3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 AL049812.1-201ENST00000432563 2267 ntBASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 MCRIP2P1-201ENST00000394346 511 ntBASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 FAM201B-201ENST00000458407 597 ntBASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 AL589743.5-201ENST00000616611 1050 ntBASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 AL161938.1-201ENST00000569833 2180 ntBASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 AC007613.1-201ENST00000572811 2597 ntBASIC17.84■□□□□ 0.45
DEPDC4Q8N2C3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 PHGDH-210ENST00000641115 1638 ntBASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DEPDC4Q8N2C3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 HLA-G-202ENST00000376815 851 ntBASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 HLA-G-203ENST00000376818 1127 ntBASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms