Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC018470.1-201ENST00000624790 3129 ntBASIC17.1■□□□□ 0.33
LRRC28Q86X40 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 AC090164.3-201ENST00000610780 2143 ntBASIC17.09■□□□□ 0.33
LRRC28Q86X40 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 AC006333.2-201ENST00000607957 2099 ntBASIC17.09■□□□□ 0.33
LRRC28Q86X40 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC28Q86X40 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC28Q86X40 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LRRC28Q86X40 PCDHB18P-201ENST00000524813 2368 ntBASIC17.08■□□□□ 0.33
LRRC28Q86X40 AL161938.1-201ENST00000569833 2180 ntBASIC17.08■□□□□ 0.33
LRRC28Q86X40 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.08■□□□□ 0.33
LRRC28Q86X40 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC28Q86X40 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRC28Q86X40 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRC28Q86X40 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC28Q86X40 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.08■□□□□ 0.33
LRRC28Q86X40 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 HCG11-201ENST00000411553 5696 ntBASIC17.08■□□□□ 0.32
LRRC28Q86X40 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC28Q86X40 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC28Q86X40 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 AL356652.1-201ENST00000615962 565 ntBASIC17.07■□□□□ 0.32
LRRC28Q86X40 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC28Q86X40 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRRC28Q86X40 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms