Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 AC087289.5-201ENST00000586076 3175 ntBASIC17.7■□□□□ 0.42
ZNF550Q7Z398 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.69■□□□□ 0.42
ZNF550Q7Z398 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF550Q7Z398 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 TEX21P-204ENST00000641479 1693 ntBASIC17.68■□□□□ 0.42
ZNF550Q7Z398 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 MTDHP1-201ENST00000605323 784 ntBASIC17.68■□□□□ 0.42
ZNF550Q7Z398 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF550Q7Z398 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 AC098818.2-201ENST00000564925 2320 ntBASIC17.67■□□□□ 0.42
ZNF550Q7Z398 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms