Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP1BQ7LBR1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP1BQ7LBR1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 AC116351.2-201ENST00000606540 1585 ntBASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 AC018553.1-201ENST00000616682 1458 ntBASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 AL353807.1-201ENST00000427475 662 ntBASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 RARRES2P10-201ENST00000564312 460 ntBASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP1BQ7LBR1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP1BQ7LBR1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
CHMP1BQ7LBR1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP1BQ7LBR1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.71■□□□□ 0.42
CHMP1BQ7LBR1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP1BQ7LBR1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 AC012618.2-201ENST00000428058 849 ntBASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 AC018445.3-201ENST00000624177 1945 ntBASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP1BQ7LBR1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 RPS2P55-201ENST00000397318 883 ntBASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 AC107956.1-201ENST00000494359 873 ntBASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 BX119927.1-201ENST00000636596 1552 ntBASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 HTR7P1-201ENST00000538670 1336 ntBASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP1BQ7LBR1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms