Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP4R4Q6NUP7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 AC098934.4-201ENST00000564127 592 ntBASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 MIR4758-201ENST00000577688 71 ntBASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 PCDHB18P-201ENST00000524813 2368 ntBASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4R4Q6NUP7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.39■□□□□ 0.54
PPP4R4Q6NUP7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PPP4R4Q6NUP7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 AL512625.2-201ENST00000417533 625 ntBASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PPP4R4Q6NUP7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 LTB4R2-202ENST00000528054 3092 ntBASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 MCRIP2P1-201ENST00000394346 511 ntBASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 AC018470.1-201ENST00000624790 3129 ntBASIC18.38■□□□□ 0.53
PPP4R4Q6NUP7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms