Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 KRT8P8-201ENST00000434750 1448 ntBASIC17.36■□□□□ 0.37
RTL6Q6ICC9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.36■□□□□ 0.37
RTL6Q6ICC9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTL6Q6ICC9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTL6Q6ICC9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTL6Q6ICC9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RTL6Q6ICC9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 INGX-201ENST00000359239 846 ntBASIC17.35■□□□□ 0.37
RTL6Q6ICC9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 AC004951.3-201ENST00000418645 1148 ntBASIC17.35■□□□□ 0.37
RTL6Q6ICC9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 ECEL1P2-202ENST00000465689 757 ntBASIC17.35■□□□□ 0.37
RTL6Q6ICC9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 AC010203.1-204ENST00000548782 407 ntBASIC17.35■□□□□ 0.37
RTL6Q6ICC9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.35■□□□□ 0.37
RTL6Q6ICC9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 AP001271.2-201ENST00000624018 1556 ntBASIC17.35■□□□□ 0.37
RTL6Q6ICC9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL6Q6ICC9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 Z85996.1-201ENST00000494644 937 ntBASIC17.34■□□□□ 0.37
RTL6Q6ICC9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL6Q6ICC9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.33■□□□□ 0.37
RTL6Q6ICC9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AC104076.2-201ENST00000448912 469 ntBASIC17.33■□□□□ 0.36
RTL6Q6ICC9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AL590326.2-201ENST00000625139 305 ntBASIC17.33■□□□□ 0.36
RTL6Q6ICC9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 AL391422.3-201ENST00000603791 2761 ntBASIC17.33■□□□□ 0.36
RTL6Q6ICC9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL6Q6ICC9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL6Q6ICC9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms