Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.17■■■□□ 2.26
CDC42BPAQ5VT25 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 AC246785.2-201ENST00000432512 513 ntBASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPAQ5VT25 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 AC026396.1-201ENST00000419388 421 ntBASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 IRF5-214ENST00000613821 595 ntTSL 5 BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC29.15■■■□□ 2.26
CDC42BPAQ5VT25 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 VPS72-207ENST00000640458 689 ntTSL 5 BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 AL391422.3-201ENST00000603791 2761 ntBASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC29.14■■■□□ 2.26
CDC42BPAQ5VT25 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC29.14■■■□□ 2.25
CDC42BPAQ5VT25 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC29.14■■■□□ 2.25
CDC42BPAQ5VT25 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CDC42BPAQ5VT25 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
CDC42BPAQ5VT25 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.25
CDC42BPAQ5VT25 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC29.14■■■□□ 2.25
CDC42BPAQ5VT25 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 SDHAP1-207ENST00000440850 2000 ntBASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC29.13■■■□□ 2.25
CDC42BPAQ5VT25 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 AC034232.1-201ENST00000506026 1064 ntBASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDC42BPAQ5VT25 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms