Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 AC083906.6-201ENST00000641366 219 ntBASIC18.69■□□□□ 0.58
RIF1Q5UIP0 AC079781.4-201ENST00000641908 219 ntBASIC18.69■□□□□ 0.58
RIF1Q5UIP0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 KRT16P6-202ENST00000425692 1426 ntBASIC18.69■□□□□ 0.58
RIF1Q5UIP0 Z83836.1-201ENST00000624605 1642 ntBASIC18.69■□□□□ 0.58
RIF1Q5UIP0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 FAM8A3P-201ENST00000427218 844 ntBASIC18.69■□□□□ 0.58
RIF1Q5UIP0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIF1Q5UIP0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 AL391807.1-203ENST00000604392 2365 ntBASIC18.68■□□□□ 0.58
RIF1Q5UIP0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIF1Q5UIP0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 YBX2P1-201ENST00000394192 760 ntBASIC18.67■□□□□ 0.58
RIF1Q5UIP0 DNAJB3-202ENST00000449667 1266 ntBASIC18.67■□□□□ 0.58
RIF1Q5UIP0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 AC112497.1-201ENST00000624824 639 ntBASIC18.67■□□□□ 0.58
RIF1Q5UIP0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 AL157888.1-201ENST00000631930 593 ntBASIC18.67■□□□□ 0.58
RIF1Q5UIP0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RIF1Q5UIP0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AC211486.1-202ENST00000416371 468 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AC211476.1-201ENST00000503899 468 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AC093909.1-201ENST00000504731 1122 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 IGHV3-22-201ENST00000520721 359 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 HLA-J-203ENST00000494367 1087 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AL136038.4-201ENST00000603606 1261 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms