Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CROCCP3-202ENST00000420820 1947 ntBASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 AC090340.1-201ENST00000620778 4980 ntBASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATPAF1Q5TC12 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 UNC93B4-201ENST00000505679 747 ntBASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATPAF1Q5TC12 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
ATPAF1Q5TC12 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 RNA5SP413-201ENST00000516373 109 ntBASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 AC120498.8-201ENST00000614275 531 ntBASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATPAF1Q5TC12 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms