Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 SLC25A1P1-201ENST00000528351 927 ntBASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 AC117500.6-201ENST00000624871 588 ntBASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 MIR662-201ENST00000384847 95 ntBASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 AL157888.1-201ENST00000631930 593 ntBASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SNAPC4Q5SXM2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 MIR574-201ENST00000385209 96 ntBASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 AL353801.3-201ENST00000609898 542 ntBASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC31.49■■■□□ 2.63
SNAPC4Q5SXM2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 AL590627.1-203ENST00000421194 1026 ntBASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC31.48■■■□□ 2.63
SNAPC4Q5SXM2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SNAPC4Q5SXM2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC31.46■■■□□ 2.63
SNAPC4Q5SXM2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SNAPC4Q5SXM2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SNAPC4Q5SXM2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SNAPC4Q5SXM2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 AC092183.1-201ENST00000469884 875 ntBASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 AF228730.7-201ENST00000641842 219 ntBASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
SNAPC4Q5SXM2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 AL391807.1-203ENST00000604392 2365 ntBASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 AF106564.1-201ENST00000607058 2553 ntBASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 AC104819.1-201ENST00000504587 486 ntBASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SNAPC4Q5SXM2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 IL9RP2-201ENST00000423948 1312 ntBASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 AC074051.2-201ENST00000565115 352 ntBASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SNAPC4Q5SXM2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 LINC00167-201ENST00000530583 1419 ntBASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms