Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 AC063952.2-201ENST00000498792 1227 ntBASIC20.36■□□□□ 0.85
VARS2Q5ST30 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 AC022616.7-201ENST00000525383 220 ntBASIC20.36■□□□□ 0.85
VARS2Q5ST30 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
VARS2Q5ST30 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
VARS2Q5ST30 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 COX11P1-201ENST00000489116 835 ntBASIC20.35■□□□□ 0.85
VARS2Q5ST30 YBX1P2-201ENST00000489612 999 ntBASIC20.35■□□□□ 0.85
VARS2Q5ST30 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 AL512604.3-201ENST00000569583 964 ntBASIC20.35■□□□□ 0.85
VARS2Q5ST30 AC087388.1-201ENST00000571370 1112 ntBASIC20.35■□□□□ 0.85
VARS2Q5ST30 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
VARS2Q5ST30 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VARS2Q5ST30 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 RNF152P1-201ENST00000397754 604 ntBASIC20.34■□□□□ 0.85
VARS2Q5ST30 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VARS2Q5ST30 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.34■□□□□ 0.85
VARS2Q5ST30 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VARS2Q5ST30 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.33■□□□□ 0.85
VARS2Q5ST30 TSPY23P-201ENST00000440136 739 ntBASIC20.33■□□□□ 0.85
VARS2Q5ST30 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VARS2Q5ST30 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.33■□□□□ 0.84
VARS2Q5ST30 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms