Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 AL157888.1-201ENST00000631930 593 ntBASIC16.71■□□□□ 0.27
LRRK2Q5S007 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 Z83836.1-201ENST00000624605 1642 ntBASIC16.7■□□□□ 0.26
LRRK2Q5S007 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 AC233702.3-201ENST00000578656 1387 ntBASIC16.7■□□□□ 0.26
LRRK2Q5S007 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 KRT16P6-202ENST00000425692 1426 ntBASIC16.7■□□□□ 0.26
LRRK2Q5S007 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRK2Q5S007 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRK2Q5S007 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 CYMP-203ENST00000474680 1263 ntBASIC16.69■□□□□ 0.26
LRRK2Q5S007 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 AC134684.3-201ENST00000641758 218 ntBASIC16.69■□□□□ 0.26
LRRK2Q5S007 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 AC009065.1-201ENST00000564055 1225 ntBASIC16.69■□□□□ 0.26
LRRK2Q5S007 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 Z69720.1-201ENST00000601483 472 ntBASIC16.69■□□□□ 0.26
LRRK2Q5S007 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRK2Q5S007 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRK2Q5S007 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 PHGDH-210ENST00000641115 1638 ntBASIC16.68■□□□□ 0.26
LRRK2Q5S007 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 AC024243.1-201ENST00000609234 778 ntBASIC16.68■□□□□ 0.26
LRRK2Q5S007 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRK2Q5S007 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms